Thank you for the log. I can see from this that the rudder pedals are being loaded in by X-Plane, but I can't see much more than that. Since our aircraft doesn't touch the toe breaks (we only trigger the X-Plane failure after real hard landings, but that is instantly visible in the X-Plane default failure page) I think it may be a joystick calibration/config issue. Can you try backing up, then removing these files inside X-Plane 11/Output/preferences:
X-Plane Calibration.prf
X-Plane Joystick Settings.prf
X-Plane Keys.prf
And removing the M20R_prefs.txt files from inside the X-Plane 11/Aircraft/AFM/M20 *version you prefer*/ folder. Let me know how this works!